Michaelas lab notebook¶

week 1 (03.05.21021 - 09.05.2021)¶

naming of the project
- Working title: EPICHAD (Epilepsy Child Adult)
- Real title: Differences in EEG recordings between children and adults, living with epilepsy
- Short discription: We want to look at the differences in EEG data in comparison between children and adults, that are living with epilepsy. Are there any general or significant disparities in the oscillation pattern during seizures and when they don’t have seizures?
- Dataset: https://openneuro.org/datasets/ds003555/versions/1.0.1 There were problems with downloading this dataset –> solution: use google chrome and not firefox/safari etc.!

updating calculator homework (adding square root function; handling error by dividion by 0; adding comments)
update timeline on GitKraken
update GitHub repository (problem automatic update of the website)
Data-Files
Preprocessing of EPICHAD Dataset
Problems: difficult preprocessing with bipolar channels, therefore we asked the authors for help.
Result: don’t use derivatives data, but the correct raw data.

fixed problem of automatically updating the website (we needed to update the TOC file)
fixed errors in preprocessing of sub01 (ICA fitting and maping works now, set correct montage)

Jupyter Notebook: plotted ICA_Components for each subject; created fixed Epochs and created Topomaps for each subject and frequency band
Jupyter Notebook Homework: look at vmin/vmax for each class (Children, Adults) and plot each frequency band again
GitHub: updated all files again (data_acess; data; overview; results; …)

created for loop in order to analyze all the subjects in a row
updated OSF page (wiki, tags and Add-ons)
updated GitHub files: deleted all “preprint” mentions; add result/preprocessing figures
set up a poster

updated GitHub files:
- added logo-picture to left corner
- updated results
- added code and pictures in data.md; result.md; analysis.md’s
worked on the poster